Atlassian MCP vs Filesystem MCP
Filesystem MCP is currently the stronger option based on benchmark score, installability, and documentation quality. Atlassian MCP scores 25/100 and Filesystem MCP scores 37/100.
Comparison
| Attribute | Atlassian MCP | Filesystem MCP |
|---|---|---|
| Category | Productivity & Docs | Files & Storage |
| GitHub stars | 5,984 | 91,107 |
| Forks | 1,391 | 11,773 |
| License | MIT | MIT |
| Last commit | Sep 19, 2026 | Oct 10, 2026 |
| Supported clients | Claude Desktop, Cursor, VS Code | Claude Desktop, Cursor, VS Code, Cline, Windsurf, Zed |
| Best for | Search and update Jira issues | Read and write local files |
| Risk level | High | High |
| Popularity score | 71 | 95 |
| Freshness score | 80 | 100 |
| Maintenance score | 95 | 100 |
| GEO score | 70 | 91 |
| Benchmark score | 25 | 37 |
| Install status | unknown | unknown |
| Startup status | unknown | unknown |
| Capability discovery | skipped missing env | passed |
| Capabilities | 0 tools / 0 resources / 0 prompts | 9 tools / 1 resources / 0 prompts |
| Docs score | 0 | 0 |
| Config score | 0 | 0 |
| Safety score | 0 | 0 |
| Last tested | Unknown | Oct 19, 2026 |
When to choose Atlassian MCP
- Your main use case is Search and update Jira issues.
When to choose Filesystem MCP
- You want broader GitHub adoption — Filesystem MCP has 91.1K stars vs 6K.
- You want the more recently maintained option (last commit Oct 10, 2026).
- Your main use case is Read and write local files.
Alternatives to Atlassian MCP and Filesystem MCP
- Notion MCP★ 4.7K · Productivity & Docs
read, search, and update Notion pages and databases
- GitHub MCP Server★ 33.5K · Developer Tools
connect to GitHub repositories, issues, pull requests, and code search
- Anki MCP Server★ 511 · Productivity & Docs
anki flashcards: adaptive review, notes, media, and deck management via AnkiConnect
- kesslerio-attio-mcp-server★ 69 · Productivity & Docs
connect AI to your Attio CRM. Manage contacts, companies, deals, and sales pipelines. Create tasks…
- yuna0x0-hackmd-mcp★ 68 · Productivity & Docs
interact with your HackMD notes and teams seamlessly. Manage your notes, view reading history, and…
- ContrastAPI★ 33 · Productivity & Docs
53 tools, 7 Resources, Sigma rules, email SPF/DMARC, MITRE, CVE/KEV, risk_score. No key
Frequently asked questions
What is the difference between Atlassian MCP and Filesystem MCP?
Atlassian MCP is an MCP server that helps AI assistants work with Jira issues and Confluence pages. Filesystem MCP is an MCP server that helps AI assistants read, write, and search files in allowed local directories. Atlassian MCP is best for Search and update Jira issues, while Filesystem MCP is best for Read and write local files.
Is Atlassian MCP or Filesystem MCP more popular on GitHub?
Filesystem MCP is more popular, with about 91.1K GitHub stars versus 6K.
Which is more actively maintained, Atlassian MCP or Filesystem MCP?
Atlassian MCP's most recent commit was Sep 19, 2026, and Filesystem MCP's was Oct 10, 2026. More recent activity is a signal of active maintenance.
Are Atlassian MCP and Filesystem MCP open source?
Atlassian MCP is open-source under the MIT license. Filesystem MCP is open-source under the MIT license.
Last updated