Filesystem MCP vs GitHub MCP Server
Filesystem MCP is currently the stronger option based on benchmark score, installability, and documentation quality. Filesystem MCP scores 37/100 and GitHub MCP Server scores 22/100.
Comparison
| Attribute | Filesystem MCP | GitHub MCP Server |
|---|---|---|
| Category | Files & Storage | Developer Tools |
| GitHub stars | 90,179 | 32,815 |
| Forks | 11,600 | 4,938 |
| License | MIT | MIT |
| Last commit | Sep 3, 2026 | Sep 8, 2026 |
| Supported clients | Claude Desktop, Cursor, VS Code, Cline, Windsurf, Zed | Claude Desktop, Cursor, VS Code, Cline, Windsurf |
| Best for | Read and write local files | Search and read repository code |
| Risk level | High | High |
| Popularity score | 95 | 87 |
| Freshness score | 100 | 100 |
| Maintenance score | 100 | 100 |
| GEO score | 73 | 70 |
| Benchmark score | 37 | 22 |
| Install status | unknown | unknown |
| Startup status | unknown | unknown |
| Capability discovery | passed | skipped missing config |
| Capabilities | 9 tools / 1 resources / 0 prompts | 0 tools / 0 resources / 0 prompts |
| Docs score | 0 | 0 |
| Config score | 0 | 0 |
| Safety score | 0 | 0 |
| Last tested | Sep 7, 2026 | Unknown |
When to choose Filesystem MCP
- You want broader GitHub adoption — Filesystem MCP has 90.2K stars vs 32.8K.
- Your main use case is Read and write local files.
When to choose GitHub MCP Server
- You want the more recently maintained option (last commit Sep 8, 2026).
- Your main use case is Search and read repository code.
Alternatives to Filesystem MCP and GitHub MCP Server
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the GitKraken MCP Server for managing repos, PRs, issues across GitHub, GitLab, Bitbucket and more
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- ChangeThisFile★ 5 · Files & Storage
convert files between 690+ formats: image, video, audio, documents, ebooks, archives. Free, no auth
- flight505-mcp_dincoder★ 2 · Files & Storage
driven Intent Negotiation — Contract-Oriented Deterministic Executable Runtime DinCoder brings the…
Frequently asked questions
What is the difference between Filesystem MCP and GitHub MCP Server?
Filesystem MCP is an MCP server that helps AI assistants read, write, and search files in allowed local directories. GitHub MCP Server is an MCP server that helps AI assistants connect to GitHub repositories, issues, pull requests, and code search. Filesystem MCP is best for Read and write local files, while GitHub MCP Server is best for Search and read repository code.
Is Filesystem MCP or GitHub MCP Server more popular on GitHub?
Filesystem MCP is more popular, with about 90.2K GitHub stars versus 32.8K.
Which is more actively maintained, Filesystem MCP or GitHub MCP Server?
Filesystem MCP's most recent commit was Sep 3, 2026, and GitHub MCP Server's was Sep 8, 2026. More recent activity is a signal of active maintenance.
Are Filesystem MCP and GitHub MCP Server open source?
Filesystem MCP is open-source under the MIT license. GitHub MCP Server is open-source under the MIT license.
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